mmLib.TLS.TLSFileFormatTLSOUT

Package mmLib :: Module TLS :: Class TLSFileFormatTLSOUT

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Type TLSFileFormatTLSOUT

   object --+    
            |    
TLSFileFormat --+
                |
               TLSFileFormatTLSOUT

Read/Write REFMAC5 TLSIN/TLSOUT files.

Method Summary
	`convert_frag_id_load(self, frag_id)` Converts the residue sequence code to a mmLib fragment_id.
	`convert_frag_id_save(self, frag_id)` Converts a mmLib fragment_id to a TLSOUT fragment id.
	`load(self, fil)` Returns a list containing one TLSGroupDesc object for each TLS group description found in the file.
	`load_supported(self)` Returns True if file loading is supported, otherwise returns False.
	`save(self, fil, tls_desc_list)` Writes the list of TLSGroupDesc object to the given file.
	`save_supported(self)` Return True if file saving is supported, otherwise returns False.
	`tlsout_tls_desc(self, tls_desc)` Converts TLSGroupDesc instance to a multi-line string format ready to write to a TLSOUT file.
Inherited from object
	`__init__(...)` x.__init__(...) initializes x; see x.__class__.__doc__ for signature
	`__delattr__(...)` x.__delattr__('name') <==> del x.name
	`__getattribute__(...)` x.__getattribute__('name') <==> x.name
	`__hash__(x)` x.__hash__() <==> hash(x)
	`__new__(T, S, ...)` T.__new__(S, ...) -> a new object with type S, a subtype of T
	`__reduce__(...)` helper for pickle
	`__reduce_ex__(...)` helper for pickle
	`__repr__(x)` x.__repr__() <==> repr(x)
	`__setattr__(...)` x.__setattr__('name', value) <==> x.name = value
	`__str__(x)` x.__str__() <==> str(x)

Class Variable Summary
`dict`	`tlsout_regex_dict` = `{'origin': <_sre.SRE_Pattern object ...`

Method Details

Converts the residue sequence code to a mmLib fragment_id.

Converts a mmLib fragment_id to a TLSOUT fragment id.

Returns a list containing one TLSGroupDesc object for each TLS group description found in the file.

Returns True if file loading is supported, otherwise returns False.

Overrides:: mmLib.TLS.TLSFileFormat.load_supported (inherited documentation)

Writes the list of TLSGroupDesc object to the given file.

Return True if file saving is supported, otherwise returns False.

Overrides:: mmLib.TLS.TLSFileFormat.save_supported (inherited documentation)

Converts TLSGroupDesc instance to a multi-line string format ready to write to a TLSOUT file.

Class Variable Details

Type:: dict
Value:: {'L': <_sre.SRE_Pattern object at 0x91bab60>, 'S': <_sre.SRE_Pattern object at 0x91ba720>, 'T': <_sre.SRE_Pattern object at 0x91ba9d8>, 'group': <_sre.SRE_Pattern object at 0xb796c1d0>, 'origin': <_sre.SRE_Pattern object at 0x9098610>, 'range': <_sre.SRE_Pattern object at 0x91d3cb8>}

Generated by Epydoc 2.1 on Sun Apr 23 22:08:38 2006