mmLib.PDB.RecordProcessor

Package mmLib :: Module PDB :: Class RecordProcessor

[show private | hide private]

Type RecordProcessor

object --+
         |
        RecordProcessor

Known Subclasses:: PDBStructureBuilder, TLSFileFormatPDB

Method Summary
	`preprocess_default(self, rec)`
	`process_ATOM(self, rec)`
	`process_default(self, rec)`
	`process_pdb_records(self, pdb_rec_iter, filter_func)` Iterates the PDB records in self, and searches for handling methods in the processor object for reading the objects.
	`__call_processor(self, rec)` Invoke callbacks on self.processor for the given record list (recs).
	`__call_processor_multi(self, record_list)` Invake callbacks expecting a list of related PDB records.
	`__is_sucsessive_record(self, prev_rec, rec)` Returns True if the current record looks like it is the sucessive PDB record in a list of records.
Inherited from object
	`__init__(...)` x.__init__(...) initializes x; see x.__class__.__doc__ for signature
	`__delattr__(...)` x.__delattr__('name') <==> del x.name
	`__getattribute__(...)` x.__getattribute__('name') <==> x.name
	`__hash__(x)` x.__hash__() <==> hash(x)
	`__new__(T, S, ...)` T.__new__(S, ...) -> a new object with type S, a subtype of T
	`__reduce__(...)` helper for pickle
	`__reduce_ex__(...)` helper for pickle
	`__repr__(x)` x.__repr__() <==> repr(x)
	`__setattr__(...)` x.__setattr__('name', value) <==> x.name = value
	`__str__(x)` x.__str__() <==> str(x)

Method Details

process_pdb_records(self, pdb_rec_iter, filter_func=None)

Iterates the PDB records in self, and searches for handling methods in the processor object for reading the objects. There are several choices for methods names for the processor objects.

__call_processor(self, rec)

Invoke callbacks on self.processor for the given record list (recs).

__call_processor_multi(self, record_list)

Invake callbacks expecting a list of related PDB records.

__is_sucsessive_record(self, prev_rec, rec)

Returns True if the current record looks like it is the sucessive PDB record in a list of records. Filds like continuation and serNum are checked, as well as record name.

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