mmLib.mmCIF.mmCIFFileParser

Package mmLib :: Module mmCIF :: Class mmCIFFileParser

[show private | hide private]

Type mmCIFFileParser

object --+
         |
        mmCIFFileParser

Stateful parser which uses the mmCIFElementFile tokenizer to read a mmCIF file and convert it into the mmCIFData/mmCIFTable/mmCIFRow data hierarchy.

Method Summary
	`gen_token_iter(self, fileobj)`
	`parse(self, token_iter, cif_file)` Stateful parser for mmCIF files.
	`parse_file(self, fileobj, cif_file)`
	`split_token(self, tokx)` Returns the mmCIF token split into a 2-tuple: (reserved word, name) where directive is one of the mmCIF reserved words: data_, loop_, global_, save_, stop_
	`syntax_error(self, err)`
Inherited from object
	`__init__(...)` x.__init__(...) initializes x; see x.__class__.__doc__ for signature
	`__delattr__(...)` x.__delattr__('name') <==> del x.name
	`__getattribute__(...)` x.__getattribute__('name') <==> x.name
	`__hash__(x)` x.__hash__() <==> hash(x)
	`__new__(T, S, ...)` T.__new__(S, ...) -> a new object with type S, a subtype of T
	`__reduce__(...)` helper for pickle
	`__reduce_ex__(...)` helper for pickle
	`__repr__(x)` x.__repr__() <==> repr(x)
	`__setattr__(...)` x.__setattr__('name', value) <==> x.name = value
	`__str__(x)` x.__str__() <==> str(x)

Method Details

parse(self, token_iter, cif_file)

Stateful parser for mmCIF files.

XXX: _loop, _data, _save tags are handled in a case-sensitive
     manor.  These tokens are case-insensitive.

split_token(self, tokx)

Returns the mmCIF token split into a 2-tuple: (reserved word, name) where directive is one of the mmCIF reserved words: data_, loop_, global_, save_, stop_

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