mmLib.TLS.GLTLSGroup

Package mmLib :: Module TLS :: Class GLTLSGroup

[show private | hide private]

Type GLTLSGroup

object --+        
         |        
  GLObject --+    
             |    
    GLDrawList --+
                 |
                GLTLSGroup

Top level visualization object for a TLS group.

Method Summary
	`__init__(self, **args)`
	`draw_L1_surface(self)`
	`draw_L2_surface(self)`
	`draw_L3_surface(self)`
	`draw_tensors(self)` Draw tensor axis.
	`draw_tls_surface(self, Lx_eigen_vec, Lx_eigen_val, Lx_rho, Lx_pitch)` Draws the TLS probability surface for a single non-intersecting screw axis.
	`draw_Utls_axes(self)` Render the anisotropic thremal axes calculated from the TLS model.
	`draw_Utls_ellipse(self)` Render the anisotropic thremal ellipsoids at the given probability contour calculated from the TLS model.
	`draw_Utls_rms(self)` Render the anisotropic thremal peanuts calculated from the TLS model.
	`gldl_install_draw_methods(self)` Override in children to install draw methods for a GLDrawList.
	`gldl_iter_multidraw_self(self)` Specialized draw list invokation to recycle the draw list for symmetry related copies.
	`glo_install_properties(self)` Called by GLObject.__init__ to install properties.
	`gltls_iter_atoms(self)` Special atom iterator for the TLS drawing functions yields: atm, Utls
	`set_tls_groupXXX(self, tls_group)` Set a new TLSGroup.
	`tls_update_cb(self, updates, actions)`
	`update_time(self)` Changes the time of the TLS group simulating harmonic motion.
Inherited from GLDrawList
	`gldl_draw(self)` Implement in subclass to draw somthing.
	`gldl_draw_method_compile(self, draw_method)` Compiles a draw method.
	`gldl_draw_method_delete_compiled(self, draw_method)` Deletes the compiled draw list in the current driver.
	`gldl_draw_method_delete_compiled_all_drivers(self)`
	`gldl_draw_method_get(self, draw_method_name)` Returns the draw metod of the given name or None if not found.
	`gldl_draw_method_install(self, draw_method)` Installs a draw method to compile and render a OpenGL draw listlist.
	`gldl_draw_transparent(self)` Implement in subclass to draw transparent objects.
	`gldl_get_glviewer(self)` Returns the root GLViewer object.
	`gldl_iter_multidraw_all(self)` When implemented as a iterator in a subclass, each time yield is invoked the GLDrawList and all its decendants will be rendered from whatever OpenGL coordinate system is set in the iterator.
	`gldl_pop_matrix(self)` Pop the roatated/translated position.
	`gldl_property_color_rgbf(self, prop_name)` Returns the property value as a RGBF triplet.
	`gldl_push_matrix(self)` Rotate and translate to the correct position for drawing.
	`gldl_redraw(self)` Triggers a redraw of the GLViewer
	`gldl_render(self, driver, transparent)` Compile or force a recompile of this object's gl_draw list, and render the scene.
	`gldl_render_draw_methods(self, transparent)` Render all draw methods.
	`gldl_update_cb(self, updates, actions)` Properties update callback.
	`glo_remove(self)` Override GLObject's remove to also delete the compiled OpenGL draw lists.
	`glo_remove_child(self, child)` Override GLObject's remove to also delete the compiled OpenGL draw lists.
Inherited from GLObject
	`glo_add_child(self, child)`
	`glo_add_property(self, prop_desc)` Adds a new property to the GLObject.
	`glo_add_update_callback(self, func)` Adds a function which is called whenever property values change.
	`glo_append_child(self, child)` Adds a child GLObject to the end of the GLObject's child list.
	`glo_count_descendants(self)` Counts all decendant GLObjects.
	`glo_get_child(self, gl_object_id)` Returns the child GLObject matching the given gl_object_id.
	`glo_get_child_path(self, glo_id_path)` Returns the object at the given path, or None if the object does not exist.
	`glo_get_degree(self)` Returns the number of children (degree).
	`glo_get_depth(self)` Returns the depth, the root composite is depth 0.
	`glo_get_glstructure(self)` Returns the parent GLStructure object, or None if the GLObject is not a child of a GLStructure.
	`glo_get_index_path(self)` Returns the tree-path to the GLObject as a list of its integer indexes.
	`glo_get_lowest_common_ancestor(self, gl_object)` Returns the lowest common ancesotry of self and argument composite.
	`glo_get_parent(self)` Returns the parent GLObject.
	`glo_get_parent_list(self)` Returns a list of the parent GLObjects back to the root.
	`glo_get_path(self)` Returns the tree-path to the composite as a list of its parent composites.
	`glo_get_properties_id(self)` Returns the properties ID of this object.
	`glo_get_property_desc(self, name)` Return the property description dictionary for the given property name.
	`glo_get_root(self)` Returns the root GLObject.
	`glo_init_properties(self, **args)` This is a special form of update which propagates all linked values, not just the changed ones.
	`glo_is_descendant_of(self, gl_object)` Returns true if self composite is a decent of argument GLObject.
	`glo_iter_children(self)` Iterate immediate children.
	`glo_iter_preorder_traversal(self)` Preorder Traversal for GLObject composite.
	`glo_iter_property_desc(self)` Iterates over all property descriptions.
	`glo_link_child_property(self, name, child_gl_object_id, child_name)` Link the value of the GLObject's property to the value of a child property.
	`glo_name(self)` Returns the GLObject name.
	`glo_prepend_child(self, child)` Adds a child GLObject to the beginning of the GLObject's child list.
	`glo_remove_update_callback(self, func)` Removes the update callback.
	`glo_set_name(self, name)` Sets the GLObject name.
	`glo_set_properties_id(self, gl_object_id)` Set the property name for this GLObject.
	`glo_update_properties(self, **args)` Update property values and trigger update callbacks.
	`glo_update_properties_path(self, glo_id_path, value)`
Inherited from object
	`__delattr__(...)` x.__delattr__('name') <==> del x.name
	`__getattribute__(...)` x.__getattribute__('name') <==> x.name
	`__hash__(x)` x.__hash__() <==> hash(x)
	`__new__(T, S, ...)` T.__new__(S, ...) -> a new object with type S, a subtype of T
	`__reduce__(...)` helper for pickle
	`__reduce_ex__(...)` helper for pickle
	`__repr__(x)` x.__repr__() <==> repr(x)
	`__setattr__(...)` x.__setattr__('name', value) <==> x.name = value
	`__str__(x)` x.__str__() <==> str(x)

Class Variable Summary
Inherited from GLDrawList
`list`	`gldl_color_list` = `['White', 'Black', 'Blue', 'Green', 'M...`
Inherited from GLObject
`GLPropertyDefault`	`PropertyDefault` = `<mmLib.Viewer.GLPropertyDefault object...`

Method Details

draw_tensors(self)

Draw tensor axis.

draw_tls_surface(self, Lx_eigen_vec, Lx_eigen_val, Lx_rho, Lx_pitch)

Draws the TLS probability surface for a single non-intersecting screw axis. Lx_eigen_val is the vaiance (mean square deviation MSD) of the rotation about the Lx_eigen_vec axis.

draw_Utls_axes(self)

Render the anisotropic thremal axes calculated from the TLS model.

draw_Utls_ellipse(self)

Render the anisotropic thremal ellipsoids at the given probability contour calculated from the TLS model.

draw_Utls_rms(self)

Render the anisotropic thremal peanuts calculated from the TLS model.

gldl_install_draw_methods(self)

Override in children to install draw methods for a GLDrawList.

Overrides:: mmLib.Viewer.GLDrawList.gldl_install_draw_methods (inherited documentation)

gldl_iter_multidraw_self(self)

Specialized draw list invokation to recycle the draw list for symmetry related copies. Cartesian versions of the symmetry rotation and translation operators are generated by GLStructure/UnitCell classes.

Overrides:: mmLib.Viewer.GLDrawList.gldl_iter_multidraw_self

glo_install_properties(self)

Called by GLObject.__init__ to install properties.

Overrides:: mmLib.Viewer.GLDrawList.glo_install_properties (inherited documentation)

gltls_iter_atoms(self)

Special atom iterator for the TLS drawing functions yields: atm, Utls

set_tls_groupXXX(self, tls_group)

Set a new TLSGroup.

update_time(self)

Changes the time of the TLS group simulating harmonic motion.

Generated by Epydoc 2.1 on Sun Apr 23 22:08:39 2006

http://epydoc.sf.net